POP-OUT | CLOSE

An Information Portal to 110071 Biological Macromolecular Structures

Crystal structure of human DNMT1(646-1600) in complex with DNA
Sequence Clustering and Redundancy Reduction Results
3PTA
Sequence Clusters for the Sequence Entities in PDB 3PTA
Entity #1: Chains: A - DNA (cytosine-5)-methyltransferase 1 protein, length: 956 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 19715
95% 3 3 16947
90% 3 3 16523
70% 6 6 6231
50% 6 6 5804
40% 6 6 5427
30% 6 6 4871
Entity #2: Chains: B - DNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3') dna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3') dna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.