Sequence Similarity Clusters for the Entities in PDB 3PT9

Entity #1 | Chains: A
DNA (cytosine-5)-methyltransferase 1 protein, length: 873 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28829
95 % 2 5 11058 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.6
PDBFlex
90 % 2 5 10900
70 % 2 8 7402
50 % 2 8 6831
40 % 2 8 6323
30 % 2 8 5521

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures