POP-OUT | CLOSE

An Information Portal to 108263 Biological Macromolecular Structures

Crystal structure of mouse DNMT1(650-1602) in complex with DNA
Sequence Clustering and Redundancy Reduction Results
3PT6
Sequence Clusters for the Sequence Entities in PDB 3PT6
Entity #1: Chains: A,B - DNA (cytosine-5)-methyltransferase 1 protein, length: 954 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 23744
95% 3 3 10663
90% 3 3 10508
70% 4 5 7433
50% 4 5 6796
40% 4 5 6266
30% 4 5 5582
Entity #2: Chains: C,D - DNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3') dna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: I,J - DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3') dna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.