Sequence Similarity Clusters for the Entities in PDB 3PNI

Entity #1 | Chains: A,B
Ferredoxin protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14523
95 % 5 5 7577 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 5 7526
70 % 5 5 7321
50 % 6 7 5731
40 % 7 11 3656
30 % 7 11 3422

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures