Sequence Similarity Clusters for the Entities in PDB 3PNI

Entity #1 | Chains: A,B
Ferredoxin protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 13743
95 % 5 5 7168 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 5 5 7125
70 % 5 5 6921
50 % 6 7 5452
40 % 7 11 3483
30 % 7 11 3263

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.