Sequence Similarity Clusters for the Entities in PDB 3PKZ

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Recombinase Sin protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5549
95 % 1 5 1803 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 1 5 1841
70 % 1 5 1869
50 % 1 5 1903
40 % 1 5 1903
30 % 1 5 1834

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures