Sequence Similarity Clusters for the Entities in PDB 3PIQ

Entity #1 | Chains: A,C,E,G,H,J
Human monoclonal antibody 2909 Fab heavy chain protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 11148
95 % 2 2 5024
90 % 2 2 5040
70 % 1722 1909 1
50 % 3550 3934 1
40 % 3551 3935 1
30 % 4225 4663 1
Entity #2 | Chains: B,D,F,I,K,L
Human monoclonal antibody 2909 Fab light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 11330
95 % 13 14 1229
90 % 49 55 329
70 % 297 335 11
50 % 3551 3934 1
40 % 3552 3935 1
30 % 4226 4663 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.