Sequence Similarity Clusters for the Entities in PDB 3PC8

Entity #1 | Chains: A,B
DNA repair protein XRCC1 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46320
95 % 3 3 12945 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 3 4 10435
70 % 3 4 9884
50 % 3 4 8947
40 % 3 4 8196
30 % 3 4 7216
Entity #2 | Chains: C,D
DNA ligase 3 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 23626
95 % 3 5 9707 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 3 5 9595
70 % 3 5 9114
50 % 3 5 8245
40 % 3 5 7560
30 % 3 5 6670

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.