Sequence Similarity Clusters for the Entities in PDB 3P1R

Entity #1 | Chains: A
14-3-3 protein sigma protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 12236
95 % 17 54 649 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 17 54 673
70 % 20 120 174
50 % 20 124 195
40 % 20 124 210
30 % 20 124 219
Entity #2 | Chains: P
6-mer peptide from Potassium channel subfamily K member 9 protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.