Sequence Similarity Clusters for the Entities in PDB 3OQA

Entity #1 | Chains: A
HIV-1 Protease protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72015
95 % 29 34 1000 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 583 652 3
70 % 608 679 5
50 % 624 705 5
40 % 634 715 9
30 % 636 717 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures