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Crystal Structure of 101F Fab Bound to 15-mer Peptide Epitope
Sequence Clustering and Redundancy Reduction Results
3O41
Cluster # 3158 Members. Sequence cutoff: 90% Cluster size: 8 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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1 3IFL 2 H 12A11 FAB antibody heavy chain 10090  
2 3IFN 1 H 12A11 FAB antibody heavy chain 10090  
3 3RKD 3 D, H Monoclonal Antibody, Heavy Chain 10090  
4 3O41 2 A, H Mouse monoclonal antibody 101F Fab heavy chain 10090  
5 3IFO 1 A, H 10D5 FAB antibody heavy chain 10090  
6 3O45 2 A, H Mouse monoclonal antibody 101F 101F Fab heavy chain 10090  
7 1JRH 2 H ANTIBODY A6 FAB FRAGMENT;PEPSIN DIGESTION OF INTACT ANTIBODY 10090  
8 3IFP 1 A, C, E, H 12B4 FAB antibody heavy chain 10090  
 
Sequence Clusters for the Sequence Entities in PDB 3O41
Entity #1: Chains: B,L - Mouse monoclonal antibody 101F Fab light chain protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 15487
95% 1 2 13731
90% 2 62 265
70% 187 1291 3
50% 459 3070 1
40% 459 3071 1
30% 497 3629 1
Entity #2: Chains: A,H - Mouse monoclonal antibody 101F Fab heavy chain protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 15433
95% 1 2 13701
90% 4 8 3158
70% 225 1480 2
50% 460 3070 1
40% 460 3071 1
30% 498 3629 1
Entity #3: Chains: C,P - Fusion glycoprotein F1 protein, length: 17 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.