Sequence Similarity Clusters for the Entities in PDB 3O41

Entity #1 | Chains: B,L
Mouse monoclonal antibody 101F Fab light chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22593
95 % 1 2 20231 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 7 108 147
70 % 408 2538 1
50 % 836 5152 1
40 % 1014 5806 1
30 % 1241 7240 1
Entity #2 | Chains: A,H
Mouse monoclonal antibody 101F Fab heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22594
95 % 1 2 20232 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 4 8 4649
70 % 408 2497 2
50 % 837 5152 1
40 % 1015 5806 1
30 % 1242 7240 1
Entity #3 | Chains: C,P
Fusion glycoprotein F1 protein, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3O41 1 B, L Mouse monoclonal antibody 101F Fab light chain 10090
2 3O45 1 B, L Mouse monoclonal antibody 101F 101F Fab light chain 10090