Sequence Similarity Clusters for the Entities in PDB 3NWD

Entity #1 | Chains: A,B,C,D
Envelope glycoprotein B protein, length: 703 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 7818
95 % 5 6 2797 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 6 2844
70 % 5 6 2824
50 % 7 10 1965
40 % 7 10 1970
30 % 7 13 1649

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures