Sequence Similarity Clusters for the Entities in PDB 3NW8

Entity #1 | Chains: A,B,C,D
Envelope glycoprotein B protein, length: 703 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 7669
95 % 2 6 2753 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 2 6 2800
70 % 2 6 2776
50 % 3 7 2644
40 % 3 7 2592
30 % 4 12 1652

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures