Sequence Similarity Clusters for the Entities in PDB 3NGH

Entity #1 | Chains: A,B
PDZ domain-containing protein 1 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20320
95 % 2 2 18400 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 2 17918
70 % 2 2 17045
50 % 2 2 14867
40 % 2 2 13242
30 % 2 2 11136

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures