Sequence Similarity Clusters for the Entities in PDB 3NGH

Entity #1 | Chains: A,B
PDZ domain-containing protein 1 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21601
95 % 2 2 19575 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 2 19021
70 % 2 2 17980
50 % 2 2 15642
40 % 2 2 13908
30 % 2 2 11709

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures