Sequence Similarity Clusters for the Entities in PDB 3MQ1

Entity #1 | Chains: A,B,C,D,E,F
Mite allergen Der p 5 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12236
95 % 1 1 11720 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.2
PDBFlex
90 % 1 1 11550
70 % 1 1 10923
50 % 1 1 9814
40 % 1 1 8880
30 % 1 2 7274

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures