Sequence Similarity Clusters for the Entities in PDB 3MQ1

Entity #1 | Chains: A,B,C,D,E,F
Mite allergen Der p 5 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 14518
95 % 1 1 13744 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.2
PDBFlex
90 % 1 1 13514
70 % 1 1 12686
50 % 1 1 11305
40 % 1 1 10238
30 % 1 2 7633

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures