Sequence Similarity Clusters for the Entities in PDB 3MQ1

Entity #1 | Chains: A,B,C,D,E,F
Mite allergen Der p 5 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 14276
95 % 1 1 13527 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.2
PDBFlex
90 % 1 1 13303
70 % 1 1 12509
50 % 1 1 11150
40 % 1 1 10103
30 % 1 2 7531

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures