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Structure and functional dissection of PG16, an antibody with broad and potent neutralization of HIV-1
Sequence Clustering and Redundancy Reduction Results
3MME
Sequence Clusters for the Sequence Entities in PDB 3MME
Entity #1: Chains: A,C,H - PG16 HEAVY CHAIN FAB protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 7478
95% 4 4 3336
90% 4 4 3375
70% 1425 1461 2
50% 2949 3031 1
40% 2950 3032 1
30% 3497 3590 1
Entity #2: Chains: B,D,L - PG16 LIGHT CHAIN FAB protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 2975
95% 4 4 3355
90% 21 21 673
70% 228 236 16
50% 2950 3031 1
40% 2951 3032 1
30% 3498 3590 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.