Sequence Similarity Clusters for the Entities in PDB 3MME

Entity #1 | Chains: A,C,H
PG16 HEAVY CHAIN FAB protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 10323
95 % 4 4 4709 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.6
PDBFlex
90 % 4 4 4733
70 % 2126 2244 2
50 % 4386 4633 1
40 % 4386 4633 1
30 % 5196 5461 1
Entity #2 | Chains: B,D,L
PG16 LIGHT CHAIN FAB protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 4291
95 % 4 4 4736 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.7
PDBFlex
90 % 70 75 259
70 % 2163 2287 1
50 % 4387 4633 1
40 % 4387 4633 1
30 % 5197 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.