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Structure and functional dissection of PG16, an antibody with broad and potent neutralization of HIV-1
Sequence Clustering and Redundancy Reduction Results
3MME
Sequence Clusters for the Sequence Entities in PDB 3MME
Entity #1: Chains: A,C,H - PG16 HEAVY CHAIN FAB protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 7993
95% 4 4 3614
90% 4 4 3651
70% 1518 1564 2
50% 3140 3242 1
40% 3141 3243 1
30% 3714 3827 1
Entity #2: Chains: B,D,L - PG16 LIGHT CHAIN FAB protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 3244
95% 4 4 3633
90% 47 47 312
70% 252 260 18
50% 3141 3242 1
40% 3142 3243 1
30% 3715 3827 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.