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An Information Portal to 105212 Biological Macromolecular Structures

Structure and functional dissection of PG16, an antibody with broad and potent neutralization of HIV-1
Sequence Clustering and Redundancy Reduction Results
3MME
Sequence Clusters for the Sequence Entities in PDB 3MME
Entity #1: Chains: A,C,H - PG16 HEAVY CHAIN FAB protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 7660
95% 4 4 3464
90% 4 4 3503
70% 1458 1498 2
50% 3016 3106 1
40% 3017 3107 1
30% 3578 3679 1
Entity #2: Chains: B,D,L - PG16 LIGHT CHAIN FAB protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 3102
95% 4 4 3484
90% 46 46 302
70% 236 244 16
50% 3017 3106 1
40% 3018 3107 1
30% 3579 3679 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.