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Structure and functional dissection of PG16, an antibody with broad and potent neutralization of HIV-1
Sequence Clustering and Redundancy Reduction Results
3MME
Sequence Clusters for the Sequence Entities in PDB 3MME
Entity #1: Chains: A,C,H - PG16 HEAVY CHAIN FAB protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 7513
95% 4 4 3353
90% 4 4 3394
70% 1442 1480 2
50% 2984 3070 1
40% 2985 3071 1
30% 3532 3629 1
Entity #2: Chains: B,D,L - PG16 LIGHT CHAIN FAB protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 2988
95% 4 4 3373
90% 21 21 676
70% 230 238 16
50% 2985 3070 1
40% 2986 3071 1
30% 3533 3629 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.