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Structure and functional dissection of PG16, an antibody with broad and potent neutralization of HIV-1
Sequence Clustering and Redundancy Reduction Results
3MME
Sequence Clusters for the Sequence Entities in PDB 3MME
Entity #1: Chains: A,C,H - PG16 HEAVY CHAIN FAB protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 8021
95% 4 4 3624
90% 4 4 3661
70% 1534 1580 2
50% 3172 3274 1
40% 3173 3275 1
30% 3750 3863 1
Entity #2: Chains: B,D,L - PG16 LIGHT CHAIN FAB protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 3251
95% 4 4 3643
90% 47 47 312
70% 252 260 18
50% 3173 3274 1
40% 3174 3275 1
30% 3751 3863 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.