POP-OUT | CLOSE

An Information Portal to 110071 Biological Macromolecular Structures

Structure and functional dissection of PG16, an antibody with broad and potent neutralization of HIV-1
Sequence Clustering and Redundancy Reduction Results
3MME
Sequence Clusters for the Sequence Entities in PDB 3MME
Entity #1: Chains: A,C,H - PG16 HEAVY CHAIN FAB protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 8152
95% 4 4 3680
90% 4 4 3713
70% 1575 1622 2
50% 3251 3355 1
40% 3252 3356 1
30% 3856 3971 1
Entity #2: Chains: B,D,L - PG16 LIGHT CHAIN FAB protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 3322
95% 4 4 3703
90% 48 48 307
70% 256 264 17
50% 3252 3355 1
40% 3253 3356 1
30% 3857 3971 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.