POP-OUT | CLOSE

An Information Portal to 110071 Biological Macromolecular Structures

Structure of SopB(155-323)-18mer DNA complex, I23 form
Sequence Clustering and Redundancy Reduction Results
3MKY
Sequence Clusters for the Sequence Entities in PDB 3MKY
Entity #1: Chains: T,U - DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3') dna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: B,P - Protein sopB protein, length: 189 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 33683
95% 1 1 25695
90% 1 1 24715
70% 1 1 22289
50% 1 1 19207
40% 1 1 16980
30% 1 1 14412
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.