Sequence Similarity Clusters for the Entities in PDB 3MJG

Entity #1 | Chains: A,B
Platelet-derived growth factor subunit B protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43169
95 % 1 1 32682 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 31241
70 % 1 1 27869
50 % 1 1 23782
40 % 1 2 7489
30 % 1 2 6606
Entity #2 | Chains: X,Y
Beta-type platelet-derived growth factor receptor protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37199
95 % 1 1 29083
90 % 1 1 28062
70 % 1 1 25327
50 % 1 1 21708
40 % 1 1 19155
30 % 1 1 16280

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures