Sequence Similarity Clusters for the Entities in PDB 3MJG

Entity #1 | Chains: A,B
Platelet-derived growth factor subunit B protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42625
95 % 1 1 32271 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 30869
70 % 1 1 27579
50 % 1 1 23535
40 % 1 2 7405
30 % 1 2 6537
Entity #2 | Chains: X,Y
Beta-type platelet-derived growth factor receptor protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36748
95 % 1 1 28738 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.7
PDBFlex
90 % 1 1 27739
70 % 1 1 25059
50 % 1 1 21485
40 % 1 1 18962
30 % 1 1 16118

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.