Sequence Similarity Clusters for the Entities in PDB 3MJG

Entity #1 | Chains: A,B
Platelet-derived growth factor subunit B protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41504
95 % 1 1 31429 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 30090
70 % 1 1 26948
50 % 1 1 23045
40 % 1 2 7206
30 % 1 2 6354
Entity #2 | Chains: X,Y
Beta-type platelet-derived growth factor receptor protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35724
95 % 1 1 27936 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.7
PDBFlex
90 % 1 1 26984
70 % 1 1 24458
50 % 1 1 21018
40 % 1 1 18549
30 % 1 1 15760

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.