Sequence Similarity Clusters for the Entities in PDB 3MJG

Entity #1 | Chains: A,B
Platelet-derived growth factor subunit B protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39746
95 % 1 1 33538 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 32096
70 % 1 1 28675
50 % 1 1 24536
40 % 1 2 7772
30 % 1 2 6734
Entity #2 | Chains: X,Y
Beta-type platelet-derived growth factor receptor protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39745
95 % 1 1 33537
90 % 1 1 32095
70 % 1 1 28674
50 % 1 1 24535
40 % 1 1 21567
30 % 1 1 17991

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures