Sequence Similarity Clusters for the Entities in PDB 3M50

Entity #1 | Chains: A
14-3-3-like protein C protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 11 2476
95 % 9 11 3115 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 9 11 3168
70 % 125 138 152
50 % 126 142 175
40 % 126 142 189
30 % 126 142 205
Entity #2 | Chains: P
N.plumbaginifolia H+-translocating ATPase mRNA protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 30244
95 % 1 3 25078 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 3 24251
70 % 1 3 22060
50 % 1 3 19096
40 % 1 3 17008
30 % 1 3 14600

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.