Sequence Similarity Clusters for the Entities in PDB 3M50

Entity #1 | Chains: A
14-3-3-like protein C protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 11 2584
95 % 9 11 3248 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 9 11 3298
70 % 132 146 150
50 % 133 150 167
40 % 133 150 179
30 % 133 150 191
Entity #2 | Chains: P
N.plumbaginifolia H+-translocating ATPase mRNA protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 31313
95 % 1 3 25925 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 3 25042
70 % 1 3 22729
50 % 1 3 19650
40 % 1 3 17485
30 % 1 3 15003

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures