Sequence Similarity Clusters for the Entities in PDB 3M50

Entity #1 | Chains: A
14-3-3-like protein C protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 11 2551
95 % 9 11 3202 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 9 11 3250
70 % 129 143 149
50 % 130 147 166
40 % 130 147 180
30 % 130 147 192
Entity #2 | Chains: P
N.plumbaginifolia H+-translocating ATPase mRNA protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 30857
95 % 1 3 25550 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 3 24686
70 % 1 3 22423
50 % 1 3 19410
40 % 1 3 17275
30 % 1 3 14822

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures