Sequence Similarity Clusters for the Entities in PDB 3LRS

Entity #1 | Chains: A,C,E,H
PG-16 Heavy Chain Fab protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 10858
95 % 1 4 4964 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.5
PDBFlex
90 % 1 4 4990
70 % 1147 2429 2
50 % 2368 5021 1
40 % 2368 5021 1
30 % 2713 5951 1
Entity #2 | Chains: B,D,F,L
PG-16 Light Chain Fab protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4543
95 % 1 4 4995 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.6
PDBFlex
90 % 40 93 231
70 % 1160 2479 1
50 % 2369 5021 1
40 % 2369 5021 1
30 % 2714 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures