Sequence Similarity Clusters for the Entities in PDB 3LKU

Entity #1 | Chains: A,C,E
UPF0363 protein YOR164C protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 9684
95 % 2 5 3307
90 % 2 5 3353
70 % 2 5 3309
50 % 2 5 3246
40 % 2 5 3150
30 % 2 5 2947
Entity #2 | Chains: B,D,F
Ubiquitin-like protein MDY2 protein, length: 54 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 2775
95 % 2 5 3471
90 % 2 5 3523
70 % 2 5 3471
50 % 2 5 3383
40 % 2 5 3276
30 % 2 5 3057

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.