Sequence Similarity Clusters for the Entities in PDB 3LGT

Entity #1 | Chains: A
Protease degS protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57579
95 % 10 13 1154 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 10 13 1182
70 % 10 13 1201
50 % 10 13 1247
40 % 10 13 1239
30 % 22 29 698

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3LGI 1 A, B, C Protease degS protease domain 562 3.4.21.107 | Details
2 2QF3 1 A, B, C Protease degS residues 27-256 562 3.4.21.107 | Details
3 3LH3 1 A, B, C, D, E, F, G, H, I Protease degS protease domain 562 3.4.21.107 | Details
4 2RCE 1 A, B, C, D, E, F, G, H, I Protease degS RESIDUES 27-256 562 3.4.21.107 | Details
5 3LGU 1 A Protease degS protease domain 562 3.4.21.107 | Details
6 2QF0 1 A, B, C, D, E, F, G, H, I Protease degS residues 27-256 562 3.4.21.107 | Details
7 3LGW 1 A Protease degS protease domain 562 3.4.21.107 | Details
8 3LH1 1 A Protease degS protease domain 562 3.4.21.107 | Details
9 3B8J 1 A Protease degS RESIDUES 27-256 83333 3.4.21.107 | Details
10 3LGT 1 A Protease degS protease domain 562 3.4.21.107 | Details
11 3LGV 1 A, B, C, D, E, F, G, H, I Protease degS protease domain 562 3.4.21.107 | Details
12 3LGY 1 A Protease degS protease domain 562 3.4.21.107 | Details
13 2QGR 1 A Protease degS residues 27-256 562 3.4.21.107 | Details