POP-OUT | CLOSE

An Information Portal to 106082 Biological Macromolecular Structures

2F5 Epitope scaffold elicited anti-HIV-1 monoclonal antibody 11F10 in complex with HIV-1 GP41
Sequence Clustering and Redundancy Reduction Results
3LEX
Sequence Clusters for the Sequence Entities in PDB 3LEX
Entity #1: Chains: A,H - 11f10 Antibody Heavy Chain protein, length: 221 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 30829
95% 1 2 17744
90% 7 20 1556
70% 204 1528 2
50% 417 3170 1
40% 417 3171 1
30% 453 3753 1
Entity #2: Chains: B,L - 11f10 Antibody Light Chain protein, length: 219 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 30997
95% 9 45 593
90% 9 46 592
70% 171 1332 3
50% 418 3170 1
40% 418 3171 1
30% 454 3753 1
Entity #3: Chains: C,P - Envelope glycoprotein gp41 protein, length: 9 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.