Sequence Similarity Clusters for the Entities in PDB 3LEV

Entity #1 | Chains: A
RNA polymerase sigma factor protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25358
95 % 1 2 21094
90 % 1 2 20415
70 % 1 2 18741
50 % 1 2 16308
40 % 1 2 14566
30 % 1 2 12458
Entity #2 | Chains: L
2F5 ANTIBODY LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 9331
95 % 27 41 1151
90 % 290 585 3
70 % 828 1648 3
50 % 2032 4012 1
40 % 2033 4014 1
30 % 2317 4750 1
Entity #3 | Chains: H
2F5 ANTIBODY HEAVY CHAIN protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 18443
95 % 27 41 1149
90 % 27 41 1171
70 % 990 1945 1
50 % 2033 4012 1
40 % 2034 4014 1
30 % 2318 4750 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.