Sequence Similarity Clusters for the Entities in PDB 3LEV

Entity #1 | Chains: A
RNA polymerase sigma factor protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27395
95 % 1 2 22774 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 2 22034
70 % 1 2 20179
50 % 1 2 17504
40 % 1 2 15607
30 % 1 2 13344
Entity #2 | Chains: L
2F5 ANTIBODY LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 10172
95 % 27 41 1254
90 % 339 683 3
70 % 926 1841 2
50 % 2292 4537 1
40 % 2292 4537 1
30 % 2616 5342 1
Entity #3 | Chains: H
2F5 ANTIBODY HEAVY CHAIN protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 19968
95 % 27 41 1252 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 0.8
PDBFlex
90 % 27 41 1279
70 % 1114 2197 1
50 % 2293 4537 1
40 % 2293 4537 1
30 % 2617 5342 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.