Sequence Similarity Clusters for the Entities in PDB 3LEV

Entity #1 | Chains: A
RNA polymerase sigma factor protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26578
95 % 1 2 22084
90 % 1 2 21376
70 % 1 2 19613
50 % 1 2 17041
40 % 1 2 15200
30 % 1 2 13000
Entity #2 | Chains: L
2F5 ANTIBODY LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 9826
95 % 27 41 1209
90 % 317 640 3
70 % 893 1765 2
50 % 2214 4337 1
40 % 2214 4337 1
30 % 2518 5109 1
Entity #3 | Chains: H
2F5 ANTIBODY HEAVY CHAIN protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 19336
95 % 27 41 1206
90 % 27 41 1231
70 % 1075 2096 1
50 % 2215 4337 1
40 % 2215 4337 1
30 % 2519 5109 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.