Sequence Similarity Clusters for the Entities in PDB 3LEV

Entity #1 | Chains: A
RNA polymerase sigma factor protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28282
95 % 1 2 23506 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 1 2 22731
70 % 1 2 20738
50 % 1 2 17950
40 % 1 2 16005
30 % 1 2 13684
Entity #2 | Chains: L
2F5 ANTIBODY LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10484
95 % 27 41 1287 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 359 720 3
70 % 1158 2327 1
50 % 2370 4713 1
40 % 2370 4713 1
30 % 2709 5567 1
Entity #3 | Chains: H
2F5 ANTIBODY HEAVY CHAIN protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 20631
95 % 27 41 1284
90 % 27 41 1313
70 % 1150 2280 2
50 % 2371 4713 1
40 % 2371 4713 1
30 % 2710 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.