Sequence Similarity Clusters for the Entities in PDB 3LEV

Entity #1 | Chains: A
RNA polymerase sigma factor protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25414
95 % 1 2 21137
90 % 1 2 20454
70 % 1 2 18779
50 % 1 2 16343
40 % 1 2 14594
30 % 1 2 12482
Entity #2 | Chains: L
2F5 ANTIBODY LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 9357
95 % 27 41 1152
90 % 294 590 3
70 % 832 1653 3
50 % 2040 4026 1
40 % 2041 4028 1
30 % 2325 4764 1
Entity #3 | Chains: H
2F5 ANTIBODY HEAVY CHAIN protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 18483
95 % 27 41 1150
90 % 27 41 1172
70 % 994 1952 1
50 % 2041 4026 1
40 % 2042 4028 1
30 % 2326 4764 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.