Sequence Similarity Clusters for the Entities in PDB 3LEV

Entity #1 | Chains: A
RNA polymerase sigma factor protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26161
95 % 1 2 21750
90 % 1 2 21051
70 % 1 2 19320
50 % 1 2 16799
40 % 1 2 14988
30 % 1 2 12809
Entity #2 | Chains: L
2F5 ANTIBODY LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 9692
95 % 27 41 1184
90 % 313 624 3
70 % 876 1729 2
50 % 2149 4220 1
40 % 2149 4221 1
30 % 2437 4972 1
Entity #3 | Chains: H
2F5 ANTIBODY HEAVY CHAIN protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 19034
95 % 27 41 1181
90 % 27 41 1205
70 % 1044 2041 1
50 % 2150 4220 1
40 % 2150 4221 1
30 % 2438 4972 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.