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An Information Portal to 107049 Biological Macromolecular Structures

HIV-1 antibody 2F5 in complex with epitope scaffold ES2
Sequence Clustering and Redundancy Reduction Results
3LEV
Sequence Clusters for the Sequence Entities in PDB 3LEV
Entity #1: Chains: A - RNA polymerase sigma factor protein, length: 179 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 21814
95% 1 2 18283
90% 1 2 17728
70% 1 2 16325
50% 1 2 14292
40% 1 2 12824
30% 1 2 11012
Entity #2: Chains: L - 2F5 ANTIBODY LIGHT CHAIN protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 7 7939
95% 27 41 979
90% 184 380 5
70% 681 1339 3
50% 1631 3188 1
40% 1632 3189 1
30% 1840 3771 1
Entity #3: Chains: H - 2F5 ANTIBODY HEAVY CHAIN protein, length: 237 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 4 15838
95% 27 41 978
90% 27 41 996
70% 792 1537 2
50% 1632 3188 1
40% 1633 3189 1
30% 1841 3771 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.