Sequence Similarity Clusters for the Entities in PDB 3L2P

Entity #1 | Chains: A
DNA ligase 3 protein, length: 579 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46565
95 % 1 1 34532
90 % 1 1 33067
70 % 1 1 29611
50 % 1 1 25485
40 % 1 1 22572
30 % 5 8 5527
Entity #2 | Chains: B
5'-D(P*CP*GP*GP*GP*AP*TP*GP*CP*GP*TP*C)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
5'-D(*GP*TP*CP*GP*GP*AP*CP*TP*G)-3' dna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
5'-D(*GP*CP*CP*AP*GP*TP*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*CP*CP*G)-3' dna, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.