Sequence Similarity Clusters for the Entities in PDB 3L2P

Entity #1 | Chains: A
DNA ligase 3 protein, length: 579 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52463
95 % 1 1 38865
90 % 1 1 37089
70 % 1 1 32991
50 % 1 1 28253
40 % 1 1 25017
30 % 5 8 6201
Entity #2 | Chains: B
5'-D(P*CP*GP*GP*GP*AP*TP*GP*CP*GP*TP*C)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
5'-D(*GP*TP*CP*GP*GP*AP*CP*TP*G)-3' dna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
5'-D(*GP*CP*CP*AP*GP*TP*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*CP*CP*G)-3' dna, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures