Sequence Similarity Clusters for the Entities in PDB 3L27

Entity #1 | Chains: A,B,C,D
Polymerase cofactor VP35 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24135
95 % 10 18 1204 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.7
PDBFlex
90 % 10 18 1226
70 % 11 19 1224
50 % 11 19 1283
40 % 11 20 1192
30 % 11 20 1179

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures