Sequence Similarity Clusters for the Entities in PDB 3L26

Entity #1 | Chains: A,B
Polymerase cofactor VP35 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 16 1081
95 % 16 18 1220 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.7
PDBFlex
90 % 16 18 1237
70 % 17 19 1244
50 % 17 19 1303
40 % 18 20 1194
30 % 18 20 1195
Entity #2 | Chains: C
RNA (5'-R(*CP*GP*CP*AP*UP*GP*CP*G)-3') rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4IBG 1 A, B Polymerase cofactor VP35 unp residues 215-340 186538
2 3FKE 1 A, B Polymerase cofactor VP35 UNP residues 215-340, interferon inhibitory domain 186538
3 4IBI 1 A, B Polymerase cofactor VP35 unp residues 215-340 186538
4 4IBJ 1 A, B Polymerase cofactor VP35 unp residues 215-340 186538
5 3L29 1 A, B Polymerase cofactor VP35 Zaire Ebola VP35 interferon inhibitory domain 186538
6 4IBB 1 A, B Polymerase cofactor VP35 unp residues 215-340 186538
7 4IBC 1 A, B Polymerase cofactor VP35 unp residues 215-340 186538
8 4IBD 1 A, B Polymerase cofactor VP35 unp residues 215-340 186538
9 4IBK 1 A, B Polymerase cofactor VP35 unp residues 215-340 186538
10 3L27 1 A, B, C, D Polymerase cofactor VP35 INTERFERON INHIBITORY DOMAIN 186538
11 4IJE 1 A, B, C, D Polymerase cofactor VP35 interferon inhibitory domain (UNP residues 218-340) 186538
12 3L25 1 A, B, D, E Polymerase cofactor VP35 Zaire Ebola VP35 interferon inhibitory domain 186538
13 4IBE 1 A, B Polymerase cofactor VP35 unp residues 215-340 186538
14 4IBF 1 A, B Polymerase cofactor VP35 unp residues 215-340 186538
15 3L26 1 A, B Polymerase cofactor VP35 Zaire Ebola VP35 interferon inhibitory domain 186538
16 3L28 1 A, B, C, D, E, F Polymerase cofactor VP35 VP35 INTERFERON INHIBITORY DOMAIN 186538