Sequence Similarity Clusters for the Entities in PDB 3L26

Entity #1 | Chains: A,B
Polymerase cofactor VP35 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 12 1713
95 % 16 18 1150 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.7
PDBFlex
90 % 16 18 1177
70 % 17 19 1177
50 % 17 19 1229
40 % 18 20 1144
30 % 18 20 1130
Entity #2 | Chains: C
RNA (5'-R(*CP*GP*CP*AP*UP*GP*CP*G)-3') rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.