Sequence Similarity Clusters for the Entities in PDB 3L26

Entity #1 | Chains: A,B
Polymerase cofactor VP35 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 16 1144
95 % 16 18 1289 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 16 18 1308
70 % 17 19 1298
50 % 17 19 1352
40 % 18 20 1226
30 % 18 21 1200
Entity #2 | Chains: C
RNA (5'-R(*CP*GP*CP*AP*UP*GP*CP*G)-3') rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures