Sequence Similarity Clusters for the Entities in PDB 3L26

Entity #1 | Chains: A,B
Polymerase cofactor VP35 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 16 1195
95 % 16 18 1347 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 16 18 1367
70 % 17 19 1356
50 % 17 19 1390
40 % 18 20 1265
30 % 18 21 1238
Entity #2 | Chains: C
RNA (5'-R(*CP*GP*CP*AP*UP*GP*CP*G)-3') rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures