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An Information Portal to 106082 Biological Macromolecular Structures

Crystal structure of Reston ebolavirus VP35 RNA binding domain in complex with 18bp dsRNA
Sequence Clustering and Redundancy Reduction Results
3KS8
Sequence Clusters for the Sequence Entities in PDB 3KS8
Entity #1: Chains: E - 5'-R(*AP*GP*AP*AP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*A)-3' rna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: F - 5'-R(*UP*CP*CP*UP*CP*CP*CP*UP*CP*CP*CP*UP*CP*CP*UP*UP*CP*U)-3' rna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A,B,C,D - Polymerase cofactor VP35 protein, length: 184 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 9851
95% 2 2 9684
90% 2 2 9555
70% 2 2 9068
50% 2 2 8188
40% 2 2 7463
30% 2 2 6591
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.