POP-OUT | CLOSE

An Information Portal to 108263 Biological Macromolecular Structures

Crystal structure of Reston ebolavirus VP35 RNA binding domain in complex with 18bp dsRNA
Sequence Clustering and Redundancy Reduction Results
3KS8
Sequence Clusters for the Sequence Entities in PDB 3KS8
Entity #1: Chains: E - 5'-R(*AP*GP*AP*AP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*A)-3' rna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: F - 5'-R(*UP*CP*CP*UP*CP*CP*CP*UP*CP*CP*CP*UP*CP*CP*UP*UP*CP*U)-3' rna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A,B,C,D - Polymerase cofactor VP35 protein, length: 184 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 10115
95% 2 2 9862
90% 2 2 9725
70% 2 2 9230
50% 2 2 8330
40% 2 2 7592
30% 2 2 6692
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.