Sequence Similarity Clusters for the Entities in PDB 3JTI

Entity #1 | Chains: A
Phospholipase A2 isoform 3 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 7703
95 % 7 15 4760 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 10 26 2007
70 % 11 38 1232
50 % 26 122 350
40 % 80 312 104
30 % 80 312 116
Entity #2 | Chains: B
octapeptide from Amyloid beta A4 protein protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures