Sequence Similarity Clusters for the Entities in PDB 3JTI

Entity #1 | Chains: A
Phospholipase A2 isoform 3 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 7924
95 % 7 15 4900 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 10 26 2065
70 % 11 38 1275
50 % 26 122 368
40 % 82 317 106
30 % 82 317 119
Entity #2 | Chains: B
octapeptide from Amyloid beta A4 protein protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures