Sequence Similarity Clusters for the Entities in PDB 3JTI

Entity #1 | Chains: A
Phospholipase A2 isoform 3 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 7506
95 % 7 15 4626 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 9 22 2360
70 % 11 37 1371
50 % 26 122 340
40 % 79 309 103
30 % 79 309 116
Entity #2 | Chains: B
octapeptide from Amyloid beta A4 protein protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures