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K65R mutant HIV-1 reverse transcriptase cross-linked to DS-DNA and complexed with tenofovir-diphosphate as the incoming nucleotide substrate
Sequence Clustering and Redundancy Reduction Results
3JSM
Sequence Clusters for the Sequence Entities in PDB 3JSM
Entity #1: Chains: T - DNA (5'-D(*A*TP*GP*GP*TP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3') dna, length: 27 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: P - DNA (5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*(DDG))-3') dna, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT protein, length: 558 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 24495
95% 179 208 76
90% 179 208 79
70% 179 208 94
50% 180 209 132
40% 180 209 151
30% 180 209 166
Entity #4: Chains: B - HIV-1 REVERSE TRANSCRIPTASE P51 SUBUNIT protein, length: 437 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 61 73 236
95% 174 202 82
90% 174 202 87
70% 174 202 103
50% 175 203 136
40% 175 203 157
30% 175 203 176
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.