Sequence Similarity Clusters for the Entities in PDB 3J30

Entity #1 | Chains: A,C,E,G
CHK152 light chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 9276
95 % 37 39 788
90 % 100 102 154
70 % 2401 2416 1
50 % 4866 4892 1
40 % 4866 4892 1
30 % 5728 5759 1
Entity #2 | Chains: B,D,F,H
CHK152 heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 9277
95 % 2 2 9472
90 % 5 5 5931
70 % 2357 2366 2
50 % 4867 4892 1
40 % 4867 4892 1
30 % 5729 5759 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures