Sequence Similarity Clusters for the Entities in PDB 3J30

Entity #1 | Chains: A,C,E,G
CHK152 light chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 10821
95 % 38 40 783
90 % 106 108 147
70 % 2504 2519 1
50 % 5081 5107 1
40 % 5717 5756 1
30 % 7077 7175 1
Entity #2 | Chains: B,D,F,H
CHK152 heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 10822
95 % 2 2 10497
90 % 6 6 5199
70 % 2469 2478 2
50 % 5082 5107 1
40 % 5718 5756 1
30 % 7078 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures