Sequence Similarity Clusters for the Entities in PDB 3J30

Entity #1 | Chains: A,C,E,G
CHK152 light chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 8740
95 % 37 39 744
90 % 81 83 251
70 % 1809 1822 2
50 % 4463 4489 1
40 % 4463 4489 1
30 % 5259 5290 1
Entity #2 | Chains: B,D,F,H
CHK152 heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 8741
95 % 2 2 8960
90 % 5 5 5542
70 % 2163 2172 1
50 % 4464 4489 1
40 % 4464 4489 1
30 % 5260 5290 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.