Sequence Similarity Clusters for the Entities in PDB 3J30

Entity #1 | Chains: A,C,E,G
CHK152 light chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 8950
95 % 37 39 762
90 % 97 99 152
70 % 2265 2280 1
50 % 4593 4619 1
40 % 4593 4619 1
30 % 5409 5440 1
Entity #2 | Chains: B,D,F,H
CHK152 heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 8951
95 % 2 2 9186
90 % 5 5 5701
70 % 2229 2238 2
50 % 4594 4619 1
40 % 4594 4619 1
30 % 5410 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.