Sequence Similarity Clusters for the Entities in PDB 3J2Z

Entity #1 | Chains: A,C,E,G
m10 light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 7541
95 % 10 10 3689
90 % 145 148 144
70 % 2458 2474 1
50 % 4983 5011 1
40 % 4983 5011 1
30 % 5908 5941 1
Entity #2 | Chains: B,D,F,H
m10 heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 7522
95 % 3 3 8094
90 % 3 3 8032
70 % 2414 2424 2
50 % 4984 5011 1
40 % 4984 5011 1
30 % 5909 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures