Sequence Similarity Clusters for the Entities in PDB 3J2Y

Entity #1 | Chains: A,C,E,G
9.8B light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 7416
95 % 9 10 3643
90 % 144 148 140
70 % 2399 2416 1
50 % 4862 4892 1
40 % 4862 4892 1
30 % 5724 5759 1
Entity #2 | Chains: B,D,F,H
9.8B heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 7398
95 % 2 3 7961
90 % 2 3 7902
70 % 2355 2366 2
50 % 4863 4892 1
40 % 4863 4892 1
30 % 5725 5759 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures