Sequence Similarity Clusters for the Entities in PDB 3J2Y

Entity #1 | Chains: A,C,E,G
9.8B light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 6691
95 % 9 10 3331
90 % 140 144 134
70 % 1737 1752 2
50 % 4242 4272 1
40 % 4242 4272 1
30 % 5003 5038 1
Entity #2 | Chains: B,D,F,H
9.8B heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 6672
95 % 2 3 7201
90 % 2 3 7169
70 % 2055 2066 1
50 % 4243 4272 1
40 % 4243 4272 1
30 % 5004 5038 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.