Sequence Similarity Clusters for the Entities in PDB 3J2Y

Entity #1 | Chains: A,C,E,G
9.8B light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 5982
95 % 9 10 2976
90 % 130 134 130
70 % 1511 1526 3
50 % 3662 3692 1
40 % 3663 3693 1
30 % 4320 4355 1
Entity #2 | Chains: B,D,F,H
9.8B heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 5963
95 % 2 3 6543
90 % 2 3 6514
70 % 1779 1790 1
50 % 3663 3692 1
40 % 3664 3693 1
30 % 4321 4355 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.