Sequence Similarity Clusters for the Entities in PDB 3J2Y

Entity #1 | Chains: A,C,E,G
9.8B light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 7555
95 % 9 10 3692
90 % 144 148 144
70 % 2462 2479 1
50 % 4991 5021 1
40 % 4991 5021 1
30 % 5916 5951 1
Entity #2 | Chains: B,D,F,H
9.8B heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 7536
95 % 2 3 8105
90 % 2 3 8042
70 % 2418 2429 2
50 % 4992 5021 1
40 % 4992 5021 1
30 % 5917 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures