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An Information Portal to 105097 Biological Macromolecular Structures

Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab 9.8B
Sequence Clustering and Redundancy Reduction Results
3J2Y
Sequence Clusters for the Sequence Entities in PDB 3J2Y
Entity #1: Chains: A,C,E,G - 9.8B light chain protein, length: 212 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 5282
95% 8 9 3058
90% 114 118 87
70% 1303 1317 3
50% 3108 3136 1
40% 3109 3137 1
30% 3680 3713 1
Entity #2: Chains: B,D,F,H - 9.8B heavy chain protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 5267
95% 2 3 5855
90% 2 3 5849
70% 1501 1511 2
50% 3109 3136 1
40% 3110 3137 1
30% 3681 3713 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.