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Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab 9.8B
Sequence Clustering and Redundancy Reduction Results
3J2Y
Sequence Clusters for the Sequence Entities in PDB 3J2Y
Entity #1: Chains: A,C,E,G - 9.8B light chain protein, length: 212 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 5632
95% 8 9 3252
90% 128 132 124
70% 1411 1426 3
50% 3373 3403 1
40% 3374 3404 1
30% 3986 4021 1
Entity #2: Chains: B,D,F,H - 9.8B heavy chain protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 5616
95% 2 3 6206
90% 2 3 6182
70% 1635 1646 2
50% 3374 3403 1
40% 3375 3404 1
30% 3987 4021 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.