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An Information Portal to 105339 Biological Macromolecular Structures

Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m242
Sequence Clustering and Redundancy Reduction Results
3J2X
Sequence Clusters for the Sequence Entities in PDB 3J2X
Entity #1: Chains: A,C,E,G - m242 light chain protein, length: 217 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 6683
95% 26 28 843
90% 62 64 272
70% 1305 1320 3
50% 3112 3142 1
40% 3113 3143 1
30% 3684 3719 1
Entity #2: Chains: B,D,F,H - m242 heavy chain protein, length: 217 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 6684
95% 1 2 7044
90% 2 3 5865
70% 1503 1514 2
50% 3113 3142 1
40% 3114 3143 1
30% 3685 3719 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.