Sequence Similarity Clusters for the Entities in PDB 3J2X

Entity #1 | Chains: A,C,E,G
m242 light chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 9475
95 % 37 40 780
90 % 102 105 152
70 % 2461 2479 1
50 % 4989 5021 1
40 % 4989 5021 1
30 % 5914 5951 1
Entity #2 | Chains: B,D,F,H
m242 heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 9476
95 % 1 2 9653
90 % 4 5 6038
70 % 2417 2429 2
50 % 4990 5021 1
40 % 4990 5021 1
30 % 5915 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures