Sequence Similarity Clusters for the Entities in PDB 3J2X

Entity #1 | Chains: A,C,E,G
m242 light chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 9219
95 % 36 39 786
90 % 98 101 157
70 % 2374 2392 1
50 % 4811 4843 1
40 % 4811 4843 1
30 % 5668 5705 1
Entity #2 | Chains: B,D,F,H
m242 heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 9220
95 % 1 2 9426
90 % 4 5 5899
70 % 2330 2342 2
50 % 4812 4843 1
40 % 4812 4843 1
30 % 5669 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures