Sequence Similarity Clusters for the Entities in PDB 3J2X

Entity #1 | Chains: A,C,E,G
m242 light chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 8889
95 % 36 39 761
90 % 95 98 152
70 % 2246 2264 1
50 % 4555 4587 1
40 % 4555 4587 1
30 % 5355 5392 1
Entity #2 | Chains: B,D,F,H
m242 heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 8890
95 % 1 2 9111
90 % 4 5 5651
70 % 2210 2222 2
50 % 4556 4587 1
40 % 4556 4587 1
30 % 5356 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.