Sequence Similarity Clusters for the Entities in PDB 3J1P

Entity #1 | Chains: A,B,C
Major capsid protein VP60 protein, length: 579 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 24359
95 % 1 1 20737
90 % 1 2 10595
70 % 1 2 10042
50 % 1 2 9117
40 % 1 2 8352
30 % 1 2 7346

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.