Sequence Similarity Clusters for the Entities in PDB 3J1P

Entity #1 | Chains: A,B,C
Major capsid protein VP60 protein, length: 579 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 24834
95 % 1 1 21151
90 % 1 2 10788
70 % 1 2 10258
50 % 1 2 9299
40 % 1 2 8517
30 % 1 2 7494

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.