Sequence Similarity Clusters for the Entities in PDB 3J1P

Entity #1 | Chains: A,B,C
Major capsid protein VP60 protein, length: 579 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23198
95 % 1 1 19769
90 % 1 2 10081
70 % 1 2 9562
50 % 1 2 8710
40 % 1 2 7980
30 % 1 2 7036

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.