Sequence Similarity Clusters for the Entities in PDB 3J1P

Entity #1 | Chains: A,B,C
Major capsid protein VP60 protein, length: 579 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 21204
95 % 1 1 18176
90 % 1 2 9163
70 % 1 2 8729
50 % 1 2 7970
40 % 1 2 7340
30 % 1 2 6509

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.