Sequence Similarity Clusters for the Entities in PDB 3J1P

Entity #1 | Chains: A,B,C
Major capsid protein VP60 protein, length: 579 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29401
95 % 1 1 25689
90 % 1 2 11528
70 % 1 2 10888
50 % 1 2 9776
40 % 1 2 8846
30 % 1 2 7630

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures