Sequence Similarity Clusters for the Entities in PDB 3IXT

Entity #1 | Chains: B,L
Motavizumab Fab light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 5748
95 % 5 6 4795 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.4
PDBFlex
90 % 478 721 3
70 % 1525 2329 1
50 % 3092 4717 1
40 % 3092 4717 1
30 % 3627 5571 1
Entity #2 | Chains: A,H
Motavizumab Fab heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 10453
95 % 4 5 5126 Flexibility: Low
Max RMSD: 5.7, Avg RMSD: 2.4
PDBFlex
90 % 5 6 4794
70 % 1492 2282 2
50 % 3093 4717 1
40 % 3093 4717 1
30 % 3628 5571 1
Entity #3 | Chains: C,P
Fusion glycoprotein F1 protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49469
95 % 1 1 37021 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 35362
70 % 1 1 31481
50 % 1 1 26957
40 % 1 1 23848
30 % 1 1 20315

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.