Sequence Similarity Clusters for the Entities in PDB 3INB

Entity #1 | Chains: A,B
Hemagglutinin glycoprotein protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33535
95 % 4 6 10506 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.4
PDBFlex
90 % 4 6 10378
70 % 4 6 9846
50 % 4 6 8914
40 % 4 6 8165
30 % 4 6 7211
Entity #2 | Chains: C,D
Membrane cofactor protein protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 2312
95 % 2 4 2968 Flexibility: Low
Max RMSD: 5.4, Avg RMSD: 2.6
PDBFlex
90 % 2 4 3006
70 % 2 4 2967
50 % 2 4 2924
40 % 2 4 2873
30 % 25 49 649

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures