Sequence Similarity Clusters for the Entities in PDB 3INB

Entity #1 | Chains: A,B
Hemagglutinin glycoprotein protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32884
95 % 4 6 10265 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.4
PDBFlex
90 % 4 6 10138
70 % 4 6 9627
50 % 4 6 8724
40 % 4 6 7996
30 % 4 6 7064
Entity #2 | Chains: C,D
Membrane cofactor protein protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 2262
95 % 2 4 2901 Flexibility: Low
Max RMSD: 5.4, Avg RMSD: 2.6
PDBFlex
90 % 2 4 2937
70 % 2 4 2898
50 % 2 4 2862
40 % 2 4 2818
30 % 25 49 641

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures