Sequence Similarity Clusters for the Entities in PDB 3INB

Entity #1 | Chains: A,B
Hemagglutinin glycoprotein protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 31653
95 % 4 6 9915
90 % 4 6 9801
70 % 4 6 9309
50 % 4 6 8435
40 % 4 6 7738
30 % 4 6 6841
Entity #2 | Chains: C,D
Membrane cofactor protein protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 2153
95 % 2 4 2794 Flexibility: Low
Max RMSD: 5.4, Avg RMSD: 2.5
PDBFlex
90 % 2 4 2835
70 % 2 4 2801
50 % 2 4 2768
40 % 2 4 2728
30 % 25 48 652

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.