Sequence Similarity Clusters for the Entities in PDB 3IJE

Entity #1 | Chains: A
Integrin alpha-V protein, length: 967 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 11 5593
95 % 4 14 4578 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.3
PDBFlex
90 % 4 14 4606
70 % 4 14 4509
50 % 4 14 4333
40 % 4 14 4134
30 % 5 16 3217
Entity #2 | Chains: B
Integrin beta-3 protein, length: 695 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 6928
95 % 5 16 3671 Flexibility: Medium
Max RMSD: 14.6, Avg RMSD: 5.7
PDBFlex
90 % 5 16 3724
70 % 5 16 3673
50 % 5 16 3573
40 % 7 22 1739
30 % 7 22 1694

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.