Sequence Similarity Clusters for the Entities in PDB 3II6

Entity #1 | Chains: A,B,C,D
DNA repair protein XRCC4 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 18835
95 % 2 3 8145
90 % 2 3 8069
70 % 5 7 3124
50 % 5 7 3057
40 % 5 7 2968
30 % 5 7 2762
Entity #2 | Chains: X,Y
DNA ligase 4 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 33406
95 % 1 1 25961
90 % 1 1 25083
70 % 1 1 22757
50 % 1 1 19601
40 % 1 1 17312
30 % 1 1 14686

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.