Sequence Similarity Clusters for the Entities in PDB 3II6

Entity #1 | Chains: A,B,C,D
DNA repair protein XRCC4 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 21276
95 % 2 3 9206
90 % 2 3 9113
70 % 6 9 2532
50 % 6 9 2506
40 % 6 9 2466
30 % 6 9 2343
Entity #2 | Chains: X,Y
DNA ligase 4 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37477
95 % 1 1 29087
90 % 1 1 28080
70 % 1 1 25381
50 % 1 1 21742
40 % 1 1 19153
30 % 1 1 16253

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.