Sequence Similarity Clusters for the Entities in PDB 3II6

Entity #1 | Chains: A,B,C,D
DNA repair protein XRCC4 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 19902
95 % 2 3 8615
90 % 2 3 8532
70 % 5 7 3307
50 % 5 7 3235
40 % 5 7 3133
30 % 5 7 2920
Entity #2 | Chains: X,Y
DNA ligase 4 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35188
95 % 1 1 27315
90 % 1 1 26393
70 % 1 1 23946
50 % 1 1 20585
40 % 1 1 18131
30 % 1 1 15368

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.