Sequence Similarity Clusters for the Entities in PDB 3I6L

Entity #1 | Chains: D
HLA class I histocompatibility antigen, A-24 alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 24 983
95 % 14 24 1349 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 205 297 36
70 % 479 705 6
50 % 480 710 6
40 % 515 761 10
30 % 559 881 15
Entity #2 | Chains: E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 426 607 2
95 % 455 651 3
90 % 460 660 4
70 % 587 898 4
50 % 599 920 3
40 % 599 920 8
30 % 599 920 12
Entity #3 | Chains: F
Nucleoprotein peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.