Sequence Similarity Clusters for the Entities in PDB 3I6L

Entity #1 | Chains: D
HLA class I histocompatibility antigen, A-24 alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 24 1010
95 % 14 24 1365 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 207 302 35
70 % 487 719 6
50 % 488 724 6
40 % 523 775 10
30 % 570 899 15
Entity #2 | Chains: E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 432 618 2
95 % 461 662 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 466 671 4
70 % 597 916 4
50 % 609 938 3
40 % 609 938 7
30 % 609 938 12
Entity #3 | Chains: F
Nucleoprotein peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures