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Newly identified epitope N1 derived from SARS-CoV N protein complexed with HLA-A*2402
Sequence Clustering and Redundancy Reduction Results
3I6L
Sequence Clusters for the Sequence Entities in PDB 3I6L
Entity #1: Chains: D - HLA class I histocompatibility antigen, A-24 alpha chain protein, length: 274 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 10 19 1126
95% 10 19 1542
90% 158 231 22
70% 379 560 7
50% 380 565 7
40% 403 601 11
30% 438 702 13
Entity #2: Chains: E - Beta-2-microglobulin protein, length: 100 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 331 479 2
95% 347 508 3
90% 351 516 3
70% 461 722 5
50% 470 740 5
40% 470 740 7
30% 470 740 11
Entity #3: Chains: F - Nucleoprotein peptide protein, length: 9 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.