Sequence Similarity Clusters for the Entities in PDB 3I6L

Entity #1 | Chains: D
HLA class I histocompatibility antigen, A-24 alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 29 972
95 % 16 29 1180 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 210 310 36
70 % 501 740 6
50 % 510 754 7
40 % 539 806 9
30 % 589 930 12
Entity #2 | Chains: E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 462 666 2
95 % 471 681 2 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 476 690 4
70 % 612 944 4
50 % 624 966 3
40 % 624 966 6
30 % 624 966 9
Entity #3 | Chains: F
Nucleoprotein peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures