Sequence Similarity Clusters for the Entities in PDB 3I6L

Entity #1 | Chains: D
HLA class I histocompatibility antigen, A-24 alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 24 975
95 % 14 24 1334 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 202 290 36
70 % 473 687 6
50 % 474 692 6
40 % 508 742 10
30 % 549 859 15
Entity #2 | Chains: E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 423 596 2
95 % 452 639 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 457 648 4
70 % 579 878 4
50 % 591 900 3
40 % 591 900 8
30 % 591 900 14
Entity #3 | Chains: F
Nucleoprotein peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.