Sequence Similarity Clusters for the Entities in PDB 3HZI

Entity #1 | Chains: A
Protein hipA protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 25372
95 % 10 13 3392 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 1.8
PDBFlex
90 % 10 13 3437
70 % 10 13 3410
50 % 10 13 3327
40 % 10 13 3224
30 % 10 13 3031
Entity #2 | Chains: B
HTH-type transcriptional regulator hipB protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 23991
95 % 3 4 13230 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 4 13018
70 % 3 4 12253
50 % 3 4 10929
40 % 3 4 9917
30 % 3 4 8640
Entity #3 | Chains: T
5'-D(*DAP*DCP*DTP*DAP*DTP*DCP*DCP*DCP*DCP*DTP*DTP*DAP*DAP*DGP*DGP*DGP*DGP*DAP*DTP*DAP*DG)-3' dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.