Sequence Similarity Clusters for the Entities in PDB 3HZI

Entity #1 | Chains: A
Protein hipA protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 12 3946
95 % 10 13 3730 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 1.7
PDBFlex
90 % 10 13 3795
70 % 10 13 3728
50 % 10 13 3637
40 % 10 13 3478
30 % 11 16 2564
Entity #2 | Chains: B
HTH-type transcriptional regulator hipB protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 17822
95 % 3 4 11803 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 4 11628
70 % 3 4 11013
50 % 3 4 9897
40 % 3 4 8961
30 % 3 4 7733
Entity #3 | Chains: T
5'-D(*DAP*DCP*DTP*DAP*DTP*DCP*DCP*DCP*DCP*DTP*DTP*DAP*DAP*DGP*DGP*DGP*DGP*DAP*DTP*DAP*DG)-3' dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures