Sequence Similarity Clusters for the Entities in PDB 3HZI

Entity #1 | Chains: A
Protein hipA protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26524
95 % 10 13 3554 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 1.8
PDBFlex
90 % 10 13 3617
70 % 10 13 3573
50 % 10 13 3477
40 % 10 13 3359
30 % 10 13 3159
Entity #2 | Chains: B
HTH-type transcriptional regulator hipB protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 25079
95 % 3 4 13815 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 4 13585
70 % 3 4 12752
50 % 3 4 11370
40 % 3 4 10300
30 % 3 4 8976
Entity #3 | Chains: T
5'-D(*DAP*DCP*DTP*DAP*DTP*DCP*DCP*DCP*DCP*DTP*DTP*DAP*DAP*DGP*DGP*DGP*DGP*DAP*DTP*DAP*DG)-3' dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures