Sequence Similarity Clusters for the Entities in PDB 3HVT

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66) protein, length: 556 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 4323
95 % 228 255 92 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 228 255 96
70 % 228 255 113
50 % 229 256 151
40 % 230 257 164
30 % 230 257 176
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51) protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 12 2705
95 % 223 249 116 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 223 249 120
70 % 223 249 135
50 % 225 251 160
40 % 225 251 175
30 % 225 251 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures