Sequence Similarity Clusters for the Entities in PDB 3HI1

Entity #1 | Chains: G,J
Glycoprotein 120 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16299
95 % 1 2 14626
90 % 6 12 2354
70 % 77 118 167
50 % 77 118 198
40 % 77 118 214
30 % 77 121 225
Entity #2 | Chains: A,L
F105 Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23916
95 % 34 46 396
90 % 324 475 4
70 % 1100 1565 3
50 % 2655 3804 1
40 % 2656 3805 1
30 % 3110 4512 1
Entity #3 | Chains: B,H
F105 Heavy Chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23696
95 % 1 2 19869
90 % 1 2 19305
70 % 1287 1846 1
50 % 2656 3804 1
40 % 2657 3805 1
30 % 3111 4512 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.