Sequence Similarity Clusters for the Entities in PDB 3HI1

Entity #1 | Chains: G,J
Glycoprotein 120 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16717
95 % 1 2 14984
90 % 6 12 2426
70 % 77 121 166
50 % 77 121 198
40 % 77 121 214
30 % 77 124 223
Entity #2 | Chains: A,L
F105 Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24497
95 % 41 56 330
90 % 343 505 3
70 % 1137 1620 3
50 % 2742 3940 1
40 % 2743 3941 1
30 % 3214 4669 1
Entity #3 | Chains: B,H
F105 Heavy Chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24275
95 % 1 2 20314
90 % 1 2 19727
70 % 1329 1912 1
50 % 2743 3940 1
40 % 2744 3941 1
30 % 3215 4669 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.