Sequence Similarity Clusters for the Entities in PDB 3HI1

Entity #1 | Chains: G,J
Glycoprotein 120 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 17980
95 % 1 2 16050
90 % 6 12 2694
70 % 81 126 179
50 % 81 126 216
40 % 81 126 238
30 % 81 129 241
Entity #2 | Chains: A,L
F105 Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26277
95 % 53 74 279
90 % 445 644 3
70 % 1240 1775 2
50 % 3024 4367 1
40 % 3024 4367 1
30 % 3538 5151 1
Entity #3 | Chains: B,H
F105 Heavy Chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26030
95 % 1 2 21716
90 % 1 2 21090
70 % 1460 2111 1
50 % 3025 4367 1
40 % 3025 4367 1
30 % 3539 5151 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.