Sequence Similarity Clusters for the Entities in PDB 3HI1

Entity #1 | Chains: G,J
Glycoprotein 120 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16841
95 % 1 2 15091
90 % 6 12 2452
70 % 77 121 167
50 % 77 121 199
40 % 77 121 217
30 % 77 124 223
Entity #2 | Chains: A,L
F105 Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24665
95 % 41 58 324
90 % 348 518 3
70 % 1147 1639 3
50 % 2766 3985 1
40 % 2767 3986 1
30 % 3239 4715 1
Entity #3 | Chains: B,H
F105 Heavy Chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24443
95 % 1 2 20440
90 % 1 2 19847
70 % 1339 1932 1
50 % 2767 3985 1
40 % 2768 3986 1
30 % 3240 4715 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.