Sequence Similarity Clusters for the Entities in PDB 3HI1

Entity #1 | Chains: G,J
Glycoprotein 120 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 18134
95 % 1 2 16188
90 % 6 12 2710
70 % 81 126 179
50 % 81 126 218
40 % 81 126 239
30 % 81 129 243
Entity #2 | Chains: A,L
F105 Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26465
95 % 53 75 279
90 % 457 665 3
70 % 1256 1803 2
50 % 3058 4435 1
40 % 3058 4435 1
30 % 3578 5225 1
Entity #3 | Chains: B,H
F105 Heavy Chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26217
95 % 1 2 21873
90 % 1 2 21241
70 % 1477 2145 1
50 % 3059 4435 1
40 % 3059 4435 1
30 % 3579 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.