Sequence Similarity Clusters for the Entities in PDB 3HI1

Entity #1 | Chains: G,J
Glycoprotein 120 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16674
95 % 1 2 14955
90 % 6 12 2422
70 % 77 121 166
50 % 77 121 198
40 % 77 121 214
30 % 77 124 223
Entity #2 | Chains: A,L
F105 Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24443
95 % 40 54 340
90 % 342 503 3
70 % 1135 1617 3
50 % 2738 3934 1
40 % 2739 3935 1
30 % 3210 4663 1
Entity #3 | Chains: B,H
F105 Heavy Chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24221
95 % 1 2 20276
90 % 1 2 19690
70 % 1327 1909 1
50 % 2739 3934 1
40 % 2740 3935 1
30 % 3211 4663 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.