Sequence Similarity Clusters for the Entities in PDB 3HI1

Entity #1 | Chains: G,J
Glycoprotein 120 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 18776
95 % 1 2 16748
90 % 6 12 2783
70 % 81 126 178
50 % 81 126 221
40 % 81 126 240
30 % 81 129 248
Entity #2 | Chains: A,L
F105 Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27383
95 % 55 79 267
90 % 475 697 3
70 % 1548 2280 1
50 % 3140 4619 1
40 % 3140 4619 1
30 % 3682 5440 1
Entity #3 | Chains: B,H
F105 Heavy Chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27129
95 % 1 2 22649
90 % 1 2 21975
70 % 1518 2238 2
50 % 3141 4619 1
40 % 3141 4619 1
30 % 3683 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.