Sequence Similarity Clusters for the Entities in PDB 3HI1

Entity #1 | Chains: G,J
Glycoprotein 120 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16408
95 % 1 2 14729
90 % 6 12 2368
70 % 77 120 165
50 % 77 120 196
40 % 77 120 211
30 % 77 123 222
Entity #2 | Chains: A,L
F105 Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24058
95 % 34 46 396
90 % 324 476 4
70 % 1108 1577 3
50 % 2672 3831 1
40 % 2673 3832 1
30 % 3141 4555 1
Entity #3 | Chains: B,H
F105 Heavy Chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23838
95 % 1 2 19986
90 % 1 2 19419
70 % 1295 1859 1
50 % 2673 3831 1
40 % 2674 3832 1
30 % 3142 4555 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.