Sequence Similarity Clusters for the Entities in PDB 3HFM

Entity #1 | Chains: L
HYHEL-10 IGG1 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38828
95 % 24 25 1791
90 % 30 32 1294
70 % 1517 1775 2
50 % 3706 4367 1
40 % 3706 4367 1
30 % 4387 5151 1
Entity #2 | Chains: H
HYHEL-10 IGG1 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57713
95 % 2 2 29545
90 % 12 12 3422
70 % 1790 2111 1
50 % 3707 4367 1
40 % 3707 4367 1
30 % 4388 5151 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 595 631 3
95 % 647 684 4
90 % 662 701 5
70 % 873 917 6
50 % 880 925 6
40 % 913 959 11
30 % 913 959 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.