Sequence Similarity Clusters for the Entities in PDB 3HFM

Entity #1 | Chains: L
HYHEL-10 IGG1 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38261
95 % 24 25 1750
90 % 30 32 1266
70 % 1497 1752 2
50 % 3628 4272 1
40 % 3628 4272 1
30 % 4293 5038 1
Entity #2 | Chains: H
HYHEL-10 IGG1 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56880
95 % 2 2 29135
90 % 11 11 3891
70 % 1753 2066 1
50 % 3629 4272 1
40 % 3629 4272 1
30 % 4294 5038 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 590 625 3
95 % 642 678 4
90 % 657 695 5
70 % 868 911 6
50 % 875 919 6
40 % 908 953 10
30 % 908 953 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.