Sequence Similarity Clusters for the Entities in PDB 3HFM

Entity #1 | Chains: L
HYHEL-10 IGG1 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35967
95 % 22 22 1911
90 % 26 26 1442
70 % 1386 1611 3
50 % 3350 3908 1
40 % 3351 3909 1
30 % 3980 4637 1
Entity #2 | Chains: H
HYHEL-10 IGG1 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53644
95 % 2 2 27398
90 % 11 11 3641
70 % 1624 1896 1
50 % 3351 3908 1
40 % 3352 3909 1
30 % 3981 4637 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 542 577 3
95 % 594 630 4
90 % 609 647 5
70 % 819 862 6
50 % 827 871 6
40 % 860 905 10
30 % 860 905 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.