Sequence Similarity Clusters for the Entities in PDB 3HFM

Entity #1 | Chains: L
HYHEL-10 IGG1 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36223
95 % 22 22 1920
90 % 26 26 1452
70 % 1392 1620 3
50 % 3370 3940 1
40 % 3371 3941 1
30 % 4000 4669 1
Entity #2 | Chains: H
HYHEL-10 IGG1 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54041
95 % 2 2 27578
90 % 11 11 3663
70 % 1634 1912 1
50 % 3371 3940 1
40 % 3372 3941 1
30 % 4001 4669 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 545 580 3
95 % 597 633 4
90 % 612 650 5
70 % 822 865 6
50 % 830 874 6
40 % 863 908 10
30 % 863 908 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.